Jorde-lab.genetics.utah.edu
Female geneflowstratifies Hindu castesScientists have long been interested in
First, there may not be enough Y-chromo-
understanding how social processes
some STRs to reveal a meaningful pattern,
modulate evolutionary forces1. A good
although a comparison of a distance matrix
example of this is the intensively studied
based on the Y-chromosome SNPs with the
Hindu caste system, which governs the mat-
matrix based on STRs yields a sig
ing practices of nearly one-sixth of the
positive correlation (
r 5 0.68,
P , 0.0025).
world's population2,3. However, there is
This high degree of consistency would not be
controversy concerning the effect of social
expected if the STR distances were due to
stratification on the genetic structure of
insufficient data.
caste communities. Here we show that dif-
Second, the lack of correlation between
ferences in social rank between castes corre-
social rank and Y-chromosome distance
spond to mitochondrial DNA (mtDNA)
might be produced by random male move-
distances between castes but not genetic
Figure 1 Neighbour-joining networks7 of genetic dis-
ment between castes. This explanation is
distances estimated from Y-chromosome
tances among caste communities.
a, Network esti-
unlikely because the Y-chromosome data
mated from 411 base pairs of hypervariable region 1
show greater differentiation between groups
Hindu populations are stratified into
of mtDNA8. Distances between upper castes (Brah-
than the mtDNA data: the proportion of
five
varna, each of which is associated with
min, n 5 41; Vysya, n 5 10; and Kshatriya, n 5 10),
genetic variation attributable to differences
a ‘status'. Ranked from lowest to highest sta-
middle castes (Yadava, n 5 48; and Kapu, n 5 52),
between groups for Y-chromosome STRs is
tus, these are Panchama, Sudra, Vysya,
and lower castes (Relli, n 5 20; Mala, n 5 25; and
0.10 (
P , 0.001), whereas that based on
Kshatriya and Brahmin4. There are approxi-
Madiga, n 5 28) are correlated with social rank. Pair-
mtDNA data is only 0.015 (
P , 0.002).
mately 2,000 castes in contemporary India,
wise estimates of the proportion of genetic variation
This result is consistent with females having
roughly grouped into these
varna. Religious
attributable to differences between groups indicate
greater intercaste gene flow than males, and
rites, access to material resources and edu-
that the genetic distance between upper and lower
agrees with historical evidence that males
cation, and occupational specialization are
castes is fourfold higher than between upper and
were less likely to change castes.
directly related to caste status. Marriages
middle castes (P , 0.001). A neighbour-joining net-
A third possible explanation is that the
between individuals of equal status are pre-
work of unique haplotypes reveals a star-like pat-
discordance is caused by differences in
ferred. Matings between a man from a
tern (data not shown) with a few short central
mutation rates between the Y-chromosome
higher
varna and a woman from a lower
branches linking nodes from which tufts of long
and mtDNA systems6. However, the greatest
varna are permissible under certain circum-
branches emerge. Lineages from different castes
observed difference in mutation rates is
stances, in which case the offspring tend to
are scattered throughout the network, consistent
between the Y-chromosome STRs and the
attain a status similar to that of their father.
with gene flow between communities or the sorting
Y-chromosome SNPs, yet these two data
In contrast, marriage of a woman from a
of lineages before the separation of castes. Analy-
sets are highly concordant.
higher
varna to a man of a lower
varna is
ses limited to transversions or excluding rapidly
The remaining explanation for the dis-
strongly discouraged. This suggests that
mutating sites within mtDNA HVS1 (ref. 9) do not
cordance, and the one most consistent with
women have limited but upward social
substantially alter these results (data not shown).
b,
the historical data, is that systematic female
mobility, whereas men have very little4.
Network of genetic distances among caste commu-
gene flow among castes produced a correla-
To test the effects of this mating system
nities estimated from Y-chromosome STRs (DYS19,
tion between social rank and mtDNA dis-
on genetic variation, we analysed mtDNA
DYS288, DYS388, DYS389A, DYS389B, DYS390 and
tances. A relative lack of male gene flow
and Y-chromosome variation in 250 indi-
DYS392) and SNPs (SRY10831, SY57 and RPS4Y)10.
resulted in no correlation between social
viduals from 12 Telegu-speaking caste pop-
Upper, middle and lower castes do not cluster
rank and Y-chromosome distances, and
ulations from northeastern Andhra Pradesh
together, and distances between upper, middle and
supports the idea that the pattern of Y-
in southern India. Castes and
varna were
lower castes are not correlated with social rank.
chromosome variation is largely the result
ranked by status into upper (Brahmin,
of mutation and genetic drift. This indicates
Kshatriya and Vysya), middle (Kapu,
Analysis of Y-chromosome data revealed
that mobility between castes of different
Yadava, Jalari and Wadabahija), and lower
that seven short-tandem repeats (STRs) and
status has been higher for females than
(Relli, Madiga and Mala) groups.
three single-nucleotide polymorphisms
males, as predicted from ethnographic
We identified 182 unique mtDNA haplo-
(SNPs) produced 107 unique haplotypes in
records. We therefore conclude that genetic
types, four of which are shared among
194 individuals for whom the data were
stratification of the Hindu caste system is
upper, middle and lower castes, seven
complete. For the STR data, the genetic dis-
driven by the social mobility of women.
between lower and middle castes, and three
tance between upper and lower castes
Michael J. Bamshad*, W. Scott Watkins†,
between middle and upper castes. No haplo-
(0.0054) is similar to that between the
Mary E. Dixon†, Lynn B. Jorde†,
types are shared exclusively between upper
upper and middle castes (0.0062), and larger
B. Bhaskara Rao‡, J. M. Naidu‡,
and lower castes. This suggests that haplo-
than that between middle and lower castes
B. V. Ravi Prasad‡, Arani Rasanayagam§,
type sharing between castes is limited by
(0.0005). Thus, caste status is not associ-
Mike F. Hammer§
social rank. The genetic distance between
ated with Y-chromosome genetic distance
Departments of *
Pediatrics and †
Human Genetics,
upper and lower castes (0.00045) is 1.5 times
Eccles Institute of Human Genetics,
greater than between the upper and middle
A statistical comparison of the genetic
University of Utah,
(0.00024) or middle and lower castes
distances based on mtDNA and Y-chromo-
Salt Lake City, Utah 84112, USA
(0.00030). Thus, mtDNA distances between
some data reveals a low, non-significant
castes of different status are stratified
correlation (
r 5 0.14,
P . 0.3) by the Man-
‡
Department of Anthropology,
according to social rank (Fig. 1a). This is
tel permutation test5. There are several pos-
Andhra University, Visakhaptnam,
consistent with higher levels of female gene
sible explanations for this lack of
Andhra Pradesh, India
flow between more closely ranked castes.
§Laboratory of Molecular Systematics and
Nature Macmillan Publishers Ltd 1998
NATURE VOL 395 15 OCTOBER 1998 www.nature.com
Evolution, University of Arizona,
showed that indomethacin administration
Tucson, Arizona 85721, USA
concomitant with progesterone reduced the
level of 3a,5a-THP in the central nervous
1. Jorde, L. B., Bamshad, M. & Rogers, A. R.
BioEssays 20, 126–136
system from 8.2 6 1.3 ng per g to 2.3 6
2. Majumder, P. P.
Evol. Anthropol.
6, 100–110 (1998).
0.35 ng per g without altering levels of 5a-
3. Bamshad
et al. Hum. Biol. 68, 1–33 (1996).
DHP or progesterone. This treatment,
4. Tambia, S. J. in
The Character of Kinship (ed. Goody, J.) 191–229
which prevented the withdrawal of 3a,5a-
(Cambridge Univ. Press, 1973).
5. Mantel, N.
Cancer Res. 27, 209–220 (1967).
THP that normally accompanies proges-
6. Heyer, E.
et al. Hum. Mol. Genet. 6, 799–803 (1997).
terone withdrawal, completely prevented
7. Saitou, N. & Nei, M
. Mol. Biol. Evol. 4, 406–425 (1988).
the withdrawal effects of progesterone we
8. Anderson
et al. Nature 290, 457–465 (1981).
9. Wakeley, J. J.
Mol. Evol. 37, 613–623 (1993).
observed1, including acceleration in the
10. Hammer, M. F.
et al. Mol. Biol. Evol.
15, 427–441 (1998).
decay of GABA-gated current and upregu-
lation of the GABA -receptor a4 subunit.
Figure 1 Indomethacin increases stress-induced
We have shown8 that direct withdrawal of
Effects of progesterone
3a,5a-THP levels in rat cerebral cortex. Male
3a,5a-THP, in the absence of progesterone
Sprague–Dawley rats were habituated to handling
withdrawal, also results in faster decay of
or neuroactive steroid?
and injection. Indomethacin (0.1 mg per kg, intraperi-
GABA-gated current in association with
toneal) was administered 20 minutes before ethanol
upregulation of the a4 subunit. In this case,
injection stress (2 g per kg, intraperitoneal) and
withdrawal from the GABA-modulatory
Smith
et al.1 reported some interesting
3a,5a-THP levels were measured as described4.
metabolite 3a,5a-THP was accomplished
results about the effects of progesterone
Indomethacin increased stress-induced 3a,5a-THP
with the use of a 5a-reductase inhibitor to
treatment and withdrawal on the gene
levels by 58.5 6 62.0 % (P , 0.01, Student's t-test).
block 3a,5a-THP formation without alter-
encoding the GABA receptor a4 subunit,
ing progesterone levels. Taken together,
a constituent of receptors for the neuro-
numerous steroids other than 3a,5a-THP.
these results establish 3a,5a-THP as the
transmitter GABA (g-aminobutyric acid).
Therefore, even if 3a,5a-THP levels are
active agent that exhibits withdrawal prop-
However, we disagree with their conclusion
reduced by indomethacin, this does not
erties. In contrast, Morrow
et al. administer
that the effects of progesterone withdrawal
demonstrate that the effects of progesterone
indomethacin 20 minutes before ethanol
are mediated by reduced levels in the brain
withdrawal on GABA receptors are medi-
stress, which would prevent direct conver-
of the GABA receptor active neurosteroid
ated by 3a,5a-THP. Correlational evidence,
sion of 3a-DHP to 3a,5a-THP. The
although suggestive, does not establish a
indomethacin-induced increases in 3a,5a-
or allopregnanalone). The ability of
THP levels they report after ethanol stress
indomethacin to reverse the effects of
The effects of progesterone and ethanol
can be explained only by stress-induced
progesterone was interpreted as evidence
withdrawal on GABA receptor a4 subunit
effects on the degradation of 3a,5a-THP.
that the effects of progesterone were medi-
gene expression are similar. However,
We further disagree with the suggestion
ated by 3a,5a-THP. Smith
et al.1 did not
cross-tolerance between ethanol and 3a,5a-
by Morrow
et al. that our findings are purely
provide direct evidence that levels of
THP does not occur
in vivo. Indeed, chronic
correlational. Indomethacin is a highly
3a,5a-THP were reduced by indomethacin
ethanol administration produces cross-tol-
selective blocker of 3a-hydroxysteroid oxi-
(which reversed the effects of proges-
erance to benzodiazepines, but also results
doreductase activity9, and so reduces 3a,5a-
terone), or that progesterone levels were
in sensitization to both behavioural and
THP levels specifically, without altering lev-
not altered by indomethacin. In some
neurochemical responses to 3a,5a-THP4.
els of other hormones such as 5a-DHP or
cases, indomethacin can increase proges-
Moreover, this effect is greater in female
progesterone. This is therefore the most
terone levels directly2, which may explain
than male rats, suggesting that the higher
definitive procedure to determine the role of
why indomethacin can reverse the effects of
progesterone levels in female rats are associ-
the 3a,5a-THP metabolite in the upregula-
ated with greater sensitization to 3a,5a-
tion of the a4 subunit we observe after prog-
The effect of indomethacin blockade of
THP5. This sensitization is probably due to
esterone withdrawal. Direct administration
3a-hydroxysteroid oxidoreductase activity
intrinsic changes in GABA receptors, as
of 3a,5a-THP would be a less convincing
is dependent on the relative levels of 3a,5a-
concentrations of 3a,5a-THP are not
model because back-conversion to 5a-DHP
THP and its immediate precursor 5a-
altered after chronic ethanol administra-
can occur9. Furthermore, systemic adminis-
dihydroprogesterone. When 3a,5a-THP
tion4. Although the effects of ethanol4,6 and
tration of progesterone best mimics physio-
concentrations are raised after progesterone
progesterone on GABA receptor a4 gene
logical conditions in our animal model of
infusion or stress, indomethacin would
expression are known, there is no direct evi-
premenstrual syndrome, in which circulat-
block the oxidation of 3a,5a-THP, increas-
dence that 3a,5a-THP alters the expression
ing progesterone is converted in the CNS to
ing its concentration. Using the same dose
of this gene.
regimen as ref. 1 we find that stress-induced
A. Leslie Morrow*, Margaret J. VanDoren,
Earlier results from Morrow
et al. indi-
elevation of 3a,5a-THP levels in the brain
Leslie L. Devaud
cate that sensitivity to 3a,5a-THP is
are increased by pretreatment with
Departments of Psychiatry and *
Pharmacology,
increased after ethanol withdrawal4. We are
indomethacin (Fig. 1). Blockade of this
and Center for Alcohol Studies,
intrigued by this finding because recent data
enzyme with fluoxetine has also been
University of North Carolina School of Medicine,
from our laboratory indicate that withdraw-
shown to raise 3a,5a-THP levels in the rat
Chapel Hill, North Carolina 27599-7178, USA
al of 3a,5a-THP also increases ethanol
brain3. The omission of 3a,5a-THP and
potentiation of GABA-gated current in CA1
progesterone levels in the report by Smith
et
hippocampus by 71.2 6 5.4% over control
al.1 therefore raises concerns about the con-
Smith
et al. reply — Morrow
et al. are
levels. This result is consistent with reports
clusion that 3a,5a-THP mediates the effects
incorrect to state that we did not provide
of increased alcohol consumption in women
of progesterone withdrawal.
direct evidence that 3a-OH-5a-pregnan-
during the premenstrual period. Both of
Manipulation of progesterone levels in
20-one (3a,5a-THP, or allopregnanolone)
these findings clearly distinguish the effects
female rats is likely to influence the expres-
levels were reduced by indomethacin. We
of ethanol from those of benzodiazepines1,8,
sion of many genes as well as the levels of
pointed out1 that our previous studies7
which exhibit reduced GABA-modulatory
Nature Macmillan Publishers Ltd 1998
NATURE VOL 395 15 OCTOBER 1998 www.nature.com
Source: http://jorde-lab.genetics.utah.edu/elibrary/Bamshad_1998.pdf
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Date de l'assemblée vendredi 27 février 2015 10:00 Lieu de l'assemblée Halle Saint-Jacques, Bâle (entrée Brüglingerstrasse/St. Jakobs-Strasse) Type d'assemblée Assemblée générale ordinaire ISIN CH0012005267, Telekurs 1200526 Points marquants de l'ordre du jour Positions de vote Au POINT 5, le conseil propose une révision complète des statuts pour mettre en oeuvre l'ordonnance Minder. Ethos regrette la décision du conseil de proposer un seul