Ps.uci.edu
Organometallics 2008, 27, 1384–1392
Theoretical Studies of the sp2 versus sp3 C-
H Bond Activation
Chemistry of 2-Picoline by (C5Me5)2An(CH3)2 Complexes (An )
Th, U)
Ping Yang,* Ingolf Warnke,† Richard L. Martin, and P. Jeffrey Hay*
Los Alamos National Laboratory, Los Alamos, New Mexico 87545
ReceiV
ed September 18, 2007
The C-H bond activation chemistry of (C5Me5)2Th(CH3)2 and (C5Me5)2U(CH3)2 with 2-picoline (2-
methylpyridine) is examined with use of density functional techniques. In particular, the differences betweeninsertion into the ortho ring sp2 C-H bond and the methyl sp3 C-H bond are explored. The energies toform the
η2-(
N,
C)-pyridyl products resulting from the activation of the aromatic ring sp2 C-H bond arecalculated as thermodynamic products for both thorium and uranium systems with similar reaction energiesof -15.8 kcal/mol. The products corresponding to insertion into the methyl sp3 C-H bond are found tobe higher in energy by 3.5 and 5.4 kcal/mol for Th and U, respectively. In the transition states the actinideatom mediates the hydrogen migration from 2-picoline to the leaving methyl group by forming an agosticfive-centered C-H complex. The relative activation energies between sp2 and sp3 C-H bond activationdiffer slightly between Th, ∆
Eq(sp2) > ∆
Eq(sp3) and U, ∆
Eq(sp2) < ∆
Eq(sp3). These results are inagreement with the experimental observations that the sp2 insertion product is the thermodynamic productin both cases, but that the sp3 insertion product is the kinetic product in the case of Th.
N-oxide, whereas the corresponding U(IV) complexes activateonly the sp2 C-H bonds in pyridine
N-oxide (Scheme 1).1
Later studies7,8 were carried out on 2-picoline (2-methylpy-
(C5Me5)2AnR2 (where An ) Th, U; R ) CH3, CH2Ph, Ph) have
ridine), which possesses both sp2 and sp3 hybridized C-H
proven to be versatile starting materials for the synthesis of a
bonds. Deuterium labeling studies demonstrated that the thorium
diverse array of actinide organometallic systems containing
and uranium (C5Me5)2An(CH3)2 complexes react with 2-picoline
An-N bonds such as imido, hydrazonato, and ketimido
by different mechanistic reaction pathways. The thorium alkyl
complexes, which feature novel electronic properties.1–5 It has
complex (C5Me5)2Th(CH3)2 selectively activates a sp3 C-H
been observed that complexes of lanthanide, actinide, and
bond on the 2-picoline methyl group to give the kinetic R-picolyl
transition metal activate hydrocarbon substrates by different
mechanisms.6 Recently, Kiplinger and co-workers reported that
acts with additional 2-picoline to afford the thermodynamic
η2-
these actinide alkyl complexes undergo interesting C-H and
C-N bond cleavage chemistry with N-heterocycles. For
This is in marked contrast with the uranium system that only
example, the Th(IV) complexes (C
reacts with a sp2 C-H bond on the 2-picoline aromatic ring to
give the
η2-pyridyl product (C
5Me5)2Th(CH2Ph)2 readily react with the sp2 C-H bonds in
pyridine
N-oxide and the sp3 C-H bonds in 2,6-lutidine
NC5H3], see Scheme 2. The deuterium-labeling studies
suggested that the 2-picoline C-H activation chemistry isproceeded by
σ-bond metathesis for both the thorium and
* Corresponding authors. E-mail:
[email protected];
[email protected].
†
uranium (C5Me5)2An(CH3)2 complexes.8
Current address: Institut für Physikalische Chemie, Universität Karl-
sruhe (TH), Germany.
Density functional theory (DFT) methods have been em-
(1) Pool, J. A.; Scott, B. L.; Kiplinger, J. L.
J. Am. Chem. Soc. 2005,
ployed to explore actinide-ligand interactions in a variety of
complexes, using the current generation of hybrid functionals.
(2) Jantunen, K. C.; Burns, C. J.; Rodriguez, I. C.; Da Re, R. E.; Golden,
The structures, thermochemistry, and spectroscopic properties
J. T.; Morris, D. E.; Scott, B. L.; Taw, F. L.; Kiplinger, J. L.
Organometallics
2004,
23, 4682.
using such approaches provide information to compare with
(3) Kiplinger, J. L.; Morris, D. E.; Scott, B. L.; Burns, C. J.
Organo-
available structural and spectroscopic data.9–16 By comparison,
metallics 2002,
21, 3073.
(4) Wiedemann, S. H.; Lewis, J. C.; Ellman, J. A.; Bergman, R. G.
J. Am.
Chem. Soc. 2006,
128, 2452–2462.
(7) Pool, J. A.; Scott, B. L.; Kiplinger, J. L.
J. Alloys Compd. 2006,
(5) Bruno, J. W.; Smith, G. M.; Marks, T. J.; Fair, C. K.; Schultz, A. J.;
Williams, J. M.
J. Am. Chem. Soc. 1986,
108, 40–56.
(8) Kiplinger, J. L.; Scott, B. L.; Schelter, E. J.; Pool Davis Tournear,
(6) This field in transition metal has been extensively reviewed. For
J. A.
J. Alloys Compd. 2007,
444-
445, 477–482.
example: (a) Davies, J. A. W. P. L.; Liebman, J. F.; Greenberg, A., Eds.
(9) Kaltsoyannis, N.
Chem. Soc. ReV
. 2003,
32, 9–16.
SelectiV
e Hydrogencarbon ActiV
ation: Principles and Progress; VCH
(10) Bursten, B. E.; Drummond, M. L.; Li, J.
Faraday Discuss. 2003,
Publishers: New York, 1990. (b) Arndtsen, B. A.; Bergman, G. G.; Mobley,
124, 1–24, 457–8.
T. A.; Peterson, T. H.
Acc. Chem. Res. 1995,
28, 154–162. (c) Shilov, A. E.;
(11) Clark, A. E.; Martin, R. L.; Hay, P. J.; Green, J. C.; Jantunen, K. C.;
Shul'pin, G. B.
ActiV
ation and Catalytic Reactions of Saturated Hydro-
Kiplinger, J. L.
J. Phys. Chem. A 2005,
109, 5481–5491.
carbons in the Presence of Metal Complexes; Kluwer: Boston, MA, 2000.
(12) Peralta, J. E.; Batista, E. R.; Scuseria, G. E.; Martin, R. L.
J. Chem.
(d) Crabtree, R. H.
J. Chem. Soc., Dalton Trans. 2001, 2437–2450. (e)
Theory Comput. 2005,
1, 612–616.
Labinger, J. A.; Bercaw, J. E.
Nature 2002,
417, 507–514. (f) Goldberg,
(13) Hayton, T. W.; Boncella, J. M.; Scott, B. L.; Palmer, P. D.; Batista,
K. I.; Goldman, A. S., Eds.
ActiV
ation and Functionalization of C-H Bonds;
E. R.; Hay, P. J.
Science 2006,
310, 1941–1943.
ACS Symp. Ser. No. 885; American Chemical Society: Washington, DC,
(14) Gagliardi, L.; Handy, N. C.; Ioanou, A. G.; Skylaris, C.-K.; Spencer,
S.; Willetts, A.; Simper, A. M.
Chem. Phys. Lett. 1998,
283, 187–193.
10.1021/om700927n CCC: $40.75
2008 American Chemical Society
Publication on Web 03/13/2008
Bond ActiV
ation Chemistry of (C5Me5)2An(CH3)2
Organometallics, Vol. 27, No. 7, 2008 1385
Scheme 1. (C5Me5)2Th(CH3)2 and (C5Me5)2Th(CH2Ph)2 Readily React with the sp2 C-
H Bonds in Pyridine N-Oxide and the sp3
C-
H Bonds in 2,6-Lutidine N-Oxide, whereas the Corresponding U(IV) Complexes Only Activate the sp2 C-
H Bonds in
Scheme 2. The Thorium Alkyl Complex (C5Me5)2Th(CH3)2 and 2-Picoline React To Give Preferential sp3 C-
H Bond Activation
in the Presence of a More Reactive sp2 C-
H Bond, while the Analogous Uranium Complex, (C5Me5)2U(CH3)2, Reacts with only
the Ortho 2-Picoline sp2 C-
H Bond
rather little information has been available on reaction mech-
theory (DFT) techniques. The current approach chose a particular
anisms of f-element complexes such as in the aforementioned
DFT method that gave excellent thermochemical predictions for
C-H activation processes. Most studies focus on the lanthanide
actinide halide species20,21 where there are available experimental
compounds.17–19 We have performed a computational study of
quantities and applied it to the set of model Th and U reactions
the competitive sp2 versus sp3 C-H bond activation chemistry
discussed above. Our calculations employed the hybrid B3LYP
with 2-picoline and (C
functional.22,23 The Stuttgart RSC 1997 effective core potential
5Me5)2An(CH3)2 for An and Th as shown
in Scheme 2, where the competition between sp2 and sp3 C-H
(ECP) was used for the thorium and uranium atoms, where 60 core-
activations within the same reactant molecule is examined.
electrons are replaced to account for scalar relativistic effects.24The valence electrons are represented by a contracted [8s/7p/6d/
Th(IV) complexes possess a closed shell electronic ground state
4f] basis; 6-31G* basis sets were used for carbon, hydrogen, and
(5f 0), while U(IV) systems represents a high-spin (5f2) system
nitrogen. Spin–orbit interactions have not been considered explicitly.
with two unpaired electrons in f-orbitals.
The effects of polarization functions on transition states were tested
The products and resulting thermochemistry in these reactions
by reoptimizing the transition states by using the 6-31G** basis
are compared for the cases of Th(IV) and U(IV), and likely
that contains p polarization functions on hydrogen atoms. The newly
reaction precursors and transition states are also identified. We
found transition states were essentially identical structurally with
find that the actinide atom plays a fundamental role during the
the ones found by using the 6-31G* basis sets, and thermochemistry
hydrogen migration process from 2-picoline to the methyl
and reaction barriers differed by less than 0.5 kcal. Harmonic
leaving group. Agostic 5-centered transition structures for the
vibrational analyses were performed to confirm that structures were
actinide C-H activation reaction pathways are reported, to the
minima or saddle points and to obtain the thermochemical correc-
best of our knowledge, for the first time.
tions to the energy, entropy, and Gibbs free energy. Inclusion ofthese effects results in changes of ∼1 kcal/mol in reaction energiesand leads to the same relative ordering (see the Supporting
Information). All thermodynamic data were calculated at the
The equilibrium molecular structures as well as transition state
standard state (298.15 K and 1 atm). The intrinsic reaction
geometries of the actinide species involved in the C-H bond
coordinate (IRC) method was used to follow the reaction path in
activation reactions were computed with use of density functional
(20) Batista, E. R.; Martin, R. L.; Hay, P. J.
J. Chem. Phys. 2004,
121,
(15) Gagliardi, L.; Schimmelpfennig, B.; Maron, L.; Wahlgren, U.;
(21) Batista, E. R.; Martin, R. L.; Peralta, J. E.; Scuseria, G. E.
J. Chem.
Willetts, A.
Chem. Phys. Lett. 2001,
344, 207–212.
Phys. 2004,
121, 2144–2150.
(16) Kaltsoyannis N.; Hay, P. J.; Li, J ; Blaudeau, J. P.; Bursten, B. E.
(22) Becke, A. D.
J. Chem. Phys. 1993,
98, 5648.
Theoretical Studies of the Electronic Structure of Compounds of the Actinide
(23) We also tested a few functionals on the relative energies. Since
Elements. In
The Chemistry of the Actinide and Tranactinide Elements,
the geometries are not sensitive to the functional used, the single point
3rd ed.; Morss, L. R., Edelstein, N. M., Fuger, J., Eds.; Springer: Dordrecht,
energy difference was compared between thorium transition states
TS5A-2A
The Netherlands, 2006; Vol. 3.
(sp3) and
TS5A-1A (sp2): -0.54 kcal/mol for B3LYP, -0.71 kcal/mol for
(17) Sherer, E. C.; Cramer, C. J.
Organometallics 2003,
22 (8), 1682–
B3PW91, -1.42 kcal/mol for TPSS, and -1.92 kcal/mol for BMK. The
chosen functional B3LYP described the essential properties and fundamental
(18) Barros, N.; Eisenstein, O.; Maron, L.
Dalton Trans. 2006, (25),
chemistry of these compounds but slightly underestimated the energy
difference compared to others.
(19) de Almeida, K. J.; Cesar, A.
Organometallics 2006,
25, 3407–
(24) Dolg, M.; Stoll, H.; Preuss, H.; Pitzer, R. M.
J. Phys. Chem. 1993,
97, 5852.
Organometallics, Vol. 27, No. 7, 2008
Yang et al.
Figure 1. Possible isomers of the products resulting from the C-H
bond activation chemistry between (C5H5)2An(CH3)2 (An ) Th,
U) and 2-picoline. These isomers are labeled as
1A*,
1B*,
2A*,
2B*,
3A*,
3B*,
4A*, and
4B* when the ligands are Cp*, i.e.,
(C5Me5)2An(CH3)2 (An ) Th, U).
both directions from the transition state.25,26 Solvation effects wereinvestigated by using polarizable continuum models (PCM) in thesolvent toluene (
) 2.38) employing UFF atomic radii.27,28 Allcalculations were carried out with the Gaussian03 suite of codes.29Analysis of the electronic structure was carried out using the NaturalBond Orbital (NBO) approach.30
Figure 2. The calculated 3D structures for the possible sp2 and
Results and Discussion
sp3 C-H bond activation products. The geometric data obtainedfrom crystal structures (from ref 8) are shown above the calculated
In the following sections the DFT results are presented for
data, which are in parentheses. The bond lengths are given in
the species involved in the reactions of the thorium and uranium
angstroms and bond angles are given in degrees.
(C5Me5)2An(CH3)2 complexes shown in Scheme 2. First, thestructures and thermochemistries of the two classes of products
products for the C-H activation chemistry of (C5Me5)2Th(CH3)2
arising from sp2 and sp3 C-H bond activation are examined
with 2-picoline. Two isomers result from activation of the sp2
for both C5Me5 and model C5H5 ligands. These results help to
C-H bond ortho to the ring nitrogen atom, (C5Me5)2Th(CH3)
η2-
focus the subsequent study of reaction pathways in which only
(
N,
C)-6-Me-NC5H3] (
1A* and
1B*). Two additional possibilities
C5H5 ligands were employed. In the second step, adducts of
arise from activation of the sp3 C-H bond on the 2-picoline
the actinide complexes with 2-picoline were examined as
methyl group, which depend on the orientation of the methyl
precursors for the reactions. Transition states from these adducts
NC5H4] (
2A*
to the products were then identified and characterized theoreti-
and
2B*). We refer to the analogous species for the Cp ligand
cally, followed by reaction pathway analyses. Finally, the
by omitting the asterisk as simply
1A,
1B, etc.
electronic properties of all these species are analyzed.
The optimized ground-state geometries are presented in Figure
Products from Competitive sp2 versus sp3 C-
H Bond
2 and Tables 1 and 2. Table 1 compares the geometric data for
Activation Chemistry. Structures. The geometries of all
the thorium products obtained from available crystal structures
possible products for the thorium and uranium sp2 and sp3 C-H
with those data calculated for both Cp* and Cp complexes. Table
bond activation reactions were fully optimized. Both the Cp*
2 shows the corresponding geometric data for uranium com-
(C5Me5 or pentamethylcyclopentadienyl) compounds and sim-
plexes. Figure 3 illustrates the numbering and labeling scheme
plified model Cp (C5H5 or cyclopentadienyl) complexes were
employed for the following discussions regarding the calculated
examined. As illustrated in Figure 1, there are four possible
adduct, transition state, and product structures. Excellent agree-ment is obtained between the experimental and calculated
(25) Gonzalez, C.; Schlegel, H. B.
J. Chem. Phys. 1989,
90, 2154.
structures, with An-C bond lengths deviating by 0.05 Å and
(26) Gonzalez, C.; Schlegel, H. B.
J. Phys. Chem. 1990,
94, 5523.
(27) Miertus, S.; Scrocco, E.; Tomasi, J.
Chem. Phys. 1981,
55, 117.
the bond angles deviating by 3°. The largest variation is
(28) Cammi, R.; Mennucci, B.; Tomasi, J.
J. Phys. Chem. A 2000,
104,
observed for the An-N bond lengths, with deviations of only
0.05 Å. We need to point out that the only discrepancy is the
(29) Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb,
Th1-C2 bond length of the methyl group bound to the Th in
M. A.; Cheeseman, J. R.; Montgomery, J. A.; Vreven, J. T.; Kudin, K. N.;Burant, J. C.; Millam, J. M.; Iyengar, S. S.; Tomasi, J.; Barone, V.;
the sp3 product. In this case the experimental bond length (2.902
Mennucci, B.; Cossi, M.; Scalmani, G.; Rega, N.; Petersson, G. A.;
Å) is well out of the normal range of thorium carbon single
Nakatsuji, H.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.;
bond lengths of about 2.5 Å. Aside from this one exception,
Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Klene, M.; Li,X.; Knox, J. E.; Hratchian, J. P.; Cross, J. B.; Adamo, C.; Jaramillo, J.;
considering that the calculations are for gas-phase geometries
Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.;
and the X-ray crystal data are for solid-state geometries, the
Pomelli, C.; Ochterski, J. W.; Ayala, P. Y.; Morokuma, K.; Voth, G. A.;
agreement between the two is quite remarkable.
Salvador, P.; Dannenberg, J. J.; Zakrzewski, V. G.; Dapprich, S.; Daniels,A. D.; Strain, M. C.; Farkas, O.; Malick, D. K.; Rabuck, A. D.;
The Th1-C2 bond lengths in the products are slightly
Raghavachari, K.; Foresman, J. B.; Ortiz, J. V.; Cui, Q.; Baboul, A. G.;
lengthened (∼0.02 Å) compared to the Th-Cmethyl bond distance
Clifford, S.; Cioslowski, J.; Stefanov, B. B.; Liu, G.; Liashenko, A.; Piskorz,
of 2.483 Å calculated for the starting material model complex
P.; Komaromi, I.; Martin, R. L.; Fox, D. J.; Keith, T.; Al-Laham, M. A.;Peng, C. Y.; Nanayakkara, A.; Challacombe, M.; Gill, P. M. W.; Johnson,
(C5H5)2ThMe2. This result is not too surprising since the small
B.; Chen, W.; Wong, M. W.; Gonzalez, C.; Pople, J. A.
Gaussian03,
methyl group is being replaced by the more bulky picolyl ligand.
Revision C.02; Gaussian, Inc.: Wallingford, CT, 2004.
The insertion of the picolyl group also causes the angles between
(30) Glendening, E. D.; Badenhoop, J., K.; Reed, A. E.; Carpenter, J. E.;
the two C5H5 rings to increase marginally by 2–5
Bohmann, J. A.; Morales, C. M.; Weinhold, F.
NBO 5.0; Theoretical
Chemistry Institute, Univeristy of Wisconsin: Madison, WI, 2001.
metallocene framework of the reactant does not change and both
Bond ActiV
ation Chemistry of (C5Me5)2An(CH3)2
Organometallics, Vol. 27, No. 7, 2008 1387
Table 1. Experimental Data Obtained from Crystal Structures and Calculated Structural Data for the Possible Products Resulting from sp2
and sp3 C-
H Bond Activation Chemistry between (C5Me5)2Th(CH3)2 and 2-Picoline
exptl8
1A*
calcd
1A* (
1A)
calcd
1B* (
1B)
exptl8
2A*
calcd
2A* (
2A)
a The labeling scheme is shown in Figure 3, and is adopted by Tables 2-6.
b The experimental and optimized geometric parameters with C5Me5
ligands (
1A*,
1B*,
2A*,
2B*) are shown.
c The optimized geometric parameter with C5H5 ligands (
1A,
1B,
2A,
2B) are shown in parentheses.
Table 2. Experimental Data Obtained from Crystal Structures and Calculated Structural Data for the Possible Products Resulting from sp2
and sp3 C-
H Bond Activation Chemistry between (C5Me5)2U(CH3)2 and 2-Picoline
exptl8
3A*
calcd
3A* (
3A)
calcd.
3B* (
3B)
calcd
4A* (
4A)
calcd
4B* (
4B)
a The labeling scheme is shown in Figure 3, and is adopted by Tables 2-6.
b The experimental and optimized geometric parameters with C5Me5
ligands (
1A*,
1B*,
2A*,
2B*) are shown.
c The optimized geometric parameter with C5H5 ligands (
1A,
1B,
2A,
2B) are shown in parentheses.
Table 3. Summary of the Calculated Binding Energies (all values in
kcal/mol) for the Possible Adducts and Reaction Energies Relative
to the Sum of Reactants for the C-
H Bond Activation Chemistry
between 2-Picoline and (C5Me5)2An(CH3)2 or (C5H5)2An(CH3)2
(An )
Th, U)
Figure 3. The labeling scheme for calculated adducts, transition
and methyl ligands in the model C5H5 complexes are identical
states, and products in the sp2 and sp3 C-H bond activation
with the C5Me5 structures with bond lengths within 0.02 Å and
chemistry between (C5H5)2An(CH3)2 (An ) Th, U) and 2-picoline.
bond angles within 2
In particular, the structures along the reaction pathways for products
°. These errors are within the errors of
A series are shown as examples.
experimental measurement. The only noticeable difference isthe plane angle between the two C5H5 rings, which is about 10
ligands stay within the metallocene wedge. The sp2 C-H bond
larger than that observed for the more sterically congested
activation products (
1A and
1B) are
η2-(
N,
C)-pyridyl complexes
bis(pentamethylcyclopentadienyl) system. These results are
with the actinide atom lying in the plane of the coordinated
provided in tables in the Supporting Information.
picolyl ligand. On the other hand, the sp3 C-H bond activation
Thermochemistry. The computed reaction energies showing
products (
2A and
2B) have a bent configuration with the actinide
the relative stability of the products for the two insertion
center being folded out of the pyridine ring plane. The calculated
pathways for Th and U complexes are given in Table 3 and
structures for the uranium products are essentially identical with
Figure 4. Results are given for both the model C5H5 complexes
the thorium complexes with slightly shorter bond lengths, which
as well as the C5Me5 complexes studied experimentally. As
is consistent with the contraction of ionic radius as one proceeds
shown in Table 3, the reaction energies are exothermic in all
down the actinide series.
cases and range from -14.70 to -18.25 kcal/mol for the model
In general, the model C5H5 complexes perform well in
C5H5 complexes and from -7.74 to -15.81 kcal/mol for the
reproducing the geometric parameters of the C5Me5 complexes,
C5Me5 complexes. The reaction energies for the sp2 and sp3
including reactants and products for both the observed thorium
C-H bond activation pathways corresponding to the lowest
and uranium chemistry. The bonds for the coordinated picolyl
isomer for the thorium and uranium complexes are plotted in
Organometallics, Vol. 27, No. 7, 2008
Yang et al.
Figure 4. Reaction energies calculated for the sp2 and sp3 C-H
bond activation products from the reaction between (C5Me5)2-
An(CH3)2 or (C5H5)2An(CH3)2 (An ) Th, U) and 2-picoline. The
numbers on bars are the reaction energies for corresponding
compounds.
Figure 6. The calculated 3D structures for the possible adducts
involved in the C-H bond activation chemistry between
(C5H5)2Th(CH3)2 and 2-picoline.
Table 4. Calculated Geometric Parameters for 2-Picoline Adducts
with (C5H5)2An(CH3)2 (An )
Th, U)
Figure 5. The possible adducts involved along the reaction
pathways in the sp2 and sp3 C-H bond activation chemistry
5H5)2An(CH3)2 (An ) Th, U) and 2-picoline.
the Figure 4 for both C5Me5 and C5H5 ligand frameworks. The
product
1A* corresponding to the Th sp2 C-H bond activation
product is the most stable structure among all four products
considered. It lies 3.34 kcal/mol lower in energy than the isomer
2A* corresponding to the sp3 C-H bond activation product.
The same ordering is obtained for the thorium model C5H5
group encounters unfavorable steric interaction with the methyl
complexes, where
1A is 1.67 kcal/mol lower in energy than
groups on C5Me5 ligands resulting in greater congestion and a
higher energy configuration. For the uranium complexes, the
For the uranium C5Me5 complexes, the same trend is observed
relative differences between the alternate products mirror their
with
3A* being more stable in energy than
4A* by 5.36 kcal/
thorium counterparts, with
1B* and
2B* higher by 3.11 and
mol. For the C5H5 model compounds,
3A is 2.26 kcal/mol lower
2.61 kcal/mol compared to
3A* and
4A*, respectively. These
in energy than
4A. The energy difference between two products
for uranium is larger than that for thorium (Table 3). Overall,
these results are consistent with the experimental observations
in that the sp2 C-H bond activation products (
1A* and
3A*)
are the thermodynamically stable products. Since the same trends
in reaction energies are reproduced by the model C5H5 ligands,
the reaction pathways examined in later sections have employed
C5H5 ligands. Geometrical analysis regarding the differences
between the possible products provides insight into the regi-
oselectivity observed for these reactions. As illustrated in Figure
1, for the thorium complexes, other possible products are
1B*
and
2B*, but each is less stable than
1A* and
2A* by 2.92 and
2.36 kcal/mol, respectively. These numbers reduce to 2.00 and
1.26 kcal/mol for the model C5H5 complexes. In comparison to
1A*,
1B* has longer bond distances of Th-N and average
Th-C to Cp rings, but a shorter Th-C bond length. This is
Figure 7. The calculated 3D structures of the transition states
likely due to steric interactions introduced by the orientation of
involved in the sp2 and sp3 C-H bond activation of 2-picoline from
the exo methyl group on the picolyl ligand. The picolyl methyl
the thorium adduct
5A.
Bond ActiV
ation Chemistry of (C5Me5)2An(CH3)2
Organometallics, Vol. 27, No. 7, 2008 1389
Figure 8. The calculated 3D structures of the transition states
involved in the sp2 and sp3 C-H bond activation of 2-picoline from
the uranium adduct
6A.
Table 5. Metrical Data from the Calculated Transition States
Structures for the sp2 and sp3 C-
H Bond Activation Chemistry
Figure 9.
between (C
Reaction energy diagram for the sp2 and sp3 C-H bond
5Me5)2An(CH3)2 (An )
Th, U) and 2-Picoline
activation chemistry between (C5H5)2Th(CH3)2 and 2-picoline.
Table 6. Activation Energies (all values are in kcal/mol) Relative to
sp3
TS5A-2A
sp2
TS6A-3A
sp3
TS6A-4A
the Sum of Reactants
The optimized three-dimensional structures of the possible
numbers reduce to 0.85 and 0.74 kcal/mol for the C
adducts for thorium (
5A-
D), all of which are local minima,
5H5 systems.
Overall, the model C
are shown in Figure 6. The summarized geometric parameters
5H5 systems accurately reflect the relative
thermochemical relationships among the C
for the thorium 2-picoline adducts
5A and
5D and the uranium
5Me5 products, but
with smaller energy difference.
2-picoline adducts
6A and
6D are presented in Table 4. For
Adducts of (C
both thorium and uranium systems, the most stable adducts are
5H5)2An(CH3)2 (An )
Th, U) with 2-Picoline.
Although the existence of stable adducts is not required along
5A and
6A, respectively, which are the only adducts calculated
reaction paths leading to C-H bond activation, the possible
to be exothermic relative to the (C5H5)2An(CH3)2 and 2-picoline
2-picoline adducts with the model complexes (C
(An ) Th, U) were examined to gain mechanistic insights into
For all the calculated adducts, the An1-N3 distances are in
the C-H bond activation reaction processes as well as to aid
the range of 2.8–3.2 Å, which are longer than the An-N
in the identification of transition states for the C-H activation
distances of the products. The coordination interactions for these
reactions. As illustrated in Figure 5, the 2-picoline ligand can
adducts are fairly weak resulting in very small binding energies
approach the metal center in one of three ways, leading to four
and slightly longer (by 0.05 Å) An1-C2 bond lengths. The
possible adduct structures:
distances between the actinide metal center and the
o-H
(1) A frontal approach between two methyl groups. There
(An · · · H-Csp2) and the closest H atom on the methyl group
are two possible orientations for the 2-picoline ring relative to
(An · · · H-Csp3) on the coordinated 2-picoline are in the range
the plane formed by the actinide metal center and the carbon
of 3.3–3.7 Å. Therefore, no substantial interactions exist between
atoms on two methyl groups, parallel or perpendicular. The
the actinide center and these hydrogen atoms in the adduct
perpendicular conformation is preferred (
5A and
6A), while the
parallel configuration is unstable due to large unfavorable steric
However, it is worth pointing out that for the most stable
interactions between the 2-picoline methyl group and the
adduct
5A, the Th · · · H-Csp3 distance is 3.299 Å, which is
actinide methyl groups.
significantly shorter (by ∼0.5 Å) than the Th · · · H-Csp2 distance
(2) A lateral approach from the side of the metallocene. In
of 3.736 Å. In contrast, for
6A the U · · · H-Csp2 and
this case, two stable conformations can also be formed as a
U · · · H-Csp3 distances are about the same at 3.455 and 3.401
result of different orientations of the 2-picoline methyl group.
Å, respectively. This might be an indicator that the H atom on
Adducts
5B and
6B are formed when the 2-picoline methyl
the 2-picoline methyl group for sp3 activation is more easily
group is pointing toward the actinide methyl groups and
accessed in the thorium system to produce the kinetic product,
complexes
5C and
6C have the 2-picoline methyl group directed
while uranium system does not.
away from the actinide methyl groups.
The energies of the four possible adducts for both thorium
(3) A backside approach of the 2-picoline forming the linear
and uranium are summarized in Table 3. The bent metallocene
metallocene complexes
5D and
6D with the two C5H5 rings
configurations (
5A-
C,
6A-
C) are more favorable than the
being parallel.
parallel or linear metallocene configuration (
5D and
6D).
Organometallics, Vol. 27, No. 7, 2008
Yang et al.
Complexes
5D and
6D are the most unstable adducts with large
longer than the U-H bond length in (C5Me5)2U(H)(CH3), which
positive binding energies, which are 4.7 and 10.9 kcal/mol
is 2.044 Å. The migrated H atom sits closer to picoline in the
higher in energy, respectively, than the most stable adducts
5A
sp2 transition state and is located at the midpoint of two carbon
and
6A. In comparison, the formation of adducts
5B,
5C,
6B,
atoms in the transition state for sp3 activation. The leaving
and
6C shows small positive reaction energies (<1.50 kcal/
methyl group binds very weakly with a long coordination bond
mol). Since the difference between
5B,
5C,
6B, and
6C is
greater than 2.71 Å.
merely due to the orientation of the 2-picoline ring, the steric
We refer to this reaction mechanism as "agostic migration",
interactions do not have any significant effects on the formation
which is a synergistic nonadditive H-migration process. This
of these adducts.
reaction mechanism is very stereospecific. A similar reaction
Attempts to find stable adducts for the C5Me5 systems were
mechanism has been recently reported for cyclometalation of
not successful. Although local minima might not exist, one
palladium and iridium.31,32 These combined data suggest that
would expect that the configuration along the reaction pathways
an "agostic migration mechanism" is operative for the C-H
of the two reactant molecules ((C5Me5)2An(CH3)2 and 2-pi-
activation in the Th(IV) and U(IV) centers involving a five-
coline) would closely resemble structures of the adducts
center transition state. This differs slightly from the conventional
calculated for the pathways involving the model C5H5 ligand.
metathesis mechanism, which usually involves a four-center
Transition States and Reaction Pathways Involved in
transition state and a H center that does not coordinate with its
the C-
H Activation Chemistry. As the deuterium labeling
diagonal atom, in this case the actinide metal center. It has been
studies suggested that the 2-picoline C-H activation chemistry
reported for more than 30 years that agostic structures play an
proceeded by
σ-bond metathesis for both the thorium and
important role in transition metal complexes and catalytic
uranium (C5Me5)2An(CH3)2 complexes,8 we examined the role
reaction pathways.33–44 There are only a few reports regarding
of the actinide metal center in the hydrogen atom migration. A
agostic structures in actinides,45–49 and practically no mention
search for transition states was carried out for both sp2 and sp3
involving actinide reaction mechanisms.
C-H bond activation pathways starting from each adduct toverify if the proposed
σ-bond metathesis mechanism was
Reaction Pathways for Thorium and Uranium. The
operative. In the discussion that follows, TS refers to the
reaction diagram for the sp2 and sp3 C-H activation pathways
transition state and the subscript refers to the reactant and
involving the (C5H5)2Th(CH3)2 complex is shown in Figure 9.
product. For example,
TS
In the initial step, the reactants combine to form the weakly bound
5A-1A represents the transition state that
occurs along the sp2 C-H bond activation pathway starting from
(1.80 kcal/mol) adduct complex
5A. Following the sp3 insertion
adduct
5A and giving product
1A.
pathway to form the transition state
TS5A-2A (∆
Eq ) 21.46 kcal/
Transition States. Figures 7 and 8 show the transition state
mol), the product
2A is produced as a kinetic product and product.
structures involved in the sp2 and sp3 C-H bond activation of
Along the sp2 insertion pathway a slightly higher transition state
2-picoline from the most stable adduct structures for thorium
TS5A-1A is surmounted (∆
Eq ) 22.00 kcal/mol)50 on the way to
(
5A) and uranium (
6A), respectively. The geometric data for
formation of the thermodynamic product
1A (Table 6).
both systems are listed in Table 5. The most important and
As mentioned earlier, it is unlikely that structures resembling
common characteristic for these transition states are the agostic
5B,
5C, or
5D are involved in the reaction pathway, since their
structures whereby the actinide center mediates the migration
energies are 2–4 kcal/mol higher than those of
5A and also give
of the activated H atom from 2-picoline to leaving methyl group.
rise to higher activation energies for C-H insertion. The
For the thorium sp2 and sp3 C-H bond activation chemistry,
the Th · · · H-Csp2 and Th · · · H-Csp3 Th-H distances are 2.328
(31) Davies, D. L.; Donald, S. M. A.; Macgregor, S. A.
J. Am. Chem.
and 2.352 Å, respectively. This can be compared with the Th-H
Soc. 2005,
127, 13754–13755.
bond length of 2.116 Å determined for the model complex
(32) Davies, D. L.; Donald, S. M. A.; Duaij, O. A.; Macgregor, S. A.;
Plleth, M.
J. Am. Chem. Soc. 2006,
128, 4210–4211.
5Me5)2Th(H)(CH3). This indicates that a significant bonding
interaction exists between the thorium metal center and the
(33) Li, J. L.; Geng, C. Y.; Huang, X. R.; Zhang, X.; Sun, C. C.
Organometallics 2007,
26, 2203–2210.
migrating H atom. As illustrated in Figure 7, the H atom is not
(34) Brookhart, M.; Green, M. L. H.; Parkin, G.
Proc. Natl. Acad. Sci.
completely transferred from the carbon atom to the thorium atom
U.S.A. 2007,
104, 6908–6914.
and the activated carbon-hydrogen bonds are significantly length-
(35) Cotton, F. A.
Inorg. Chem. 2002,
41, 643–658.
(36) Paul, A.; Musgrave, C.
Organometallics 2007,
26, 793–809.
ened in all the transition states. In the sp2 C-H bond activation
(37) Bi, S.; Lin, Z.; Jordan, R. F.
Organometallics 2004,
23, 4882–
reaction profile, the bond distance between the thorium metal center
and the carbon atom of the leaving methyl group (Th-C5) is
(38) Sakaki, S.; Takayama, T.; Sumimoto, M.; Sugimoto, M.
J. Am.
Chem. Soc. 2004,
126, 3332–3348.
strongly deformed from 2.538 Å in the adduct
5A to greater than
(39) Ben-Air, E.; Cohen, R.; Gandelman, M.; Shimon, L. J. W.; Martin,
2.77 Å in the transition state (
TS5A-1A). In
TS5A-1A, the H atom is
J. M. L.; Milstein, D.
Organometallics 2006,
25, 3190–3210.
also slightly closer to the 2-picoline (H · · · C
(40) Niu, S. Q.; Hall, M. B.
Chem. ReV
. 2000,
100, 353–405.
sp2 ) 1.340 Å) than to
the leaving Th-methyl group (H · · · C
(41) Lersch, M.; Tilset, M.
Chem. ReV
. 2005,
105, 2471–2526.
sp3 ) 1.517 Å) (Figure 7). To
(42) Ritleng, V.; Sirlin, C.; Pfeffer, M.
Chem. ReV
. 2002,
102, 1731–
compare, in the thorium-mediated sp3 C-H bond activation
chemistry, the calculated transition state
TS5A-2A shows that the H
(43) Rybtchinski, B.; Cohen, R.; Ben-David, Y.; Martin, J. M. L.;
atom is approximately located equally between the 2-picoline
Milstein, D.
J. Am. Chem. Soc. 2003,
125, 11041–11050.
(44) Gilbert, T. M.; Hristov, I.; Ziegler, T.
Organometallics 2001,
20,
methyl carbon (H · · · Csp3 ) 1.431 Å) and the leaving Th-methyl
group (H · · · Csp3 ) 1.450 Å).
(45) Cruz, C.; Emslie, D.; Harrington, L.; Britten, J.; Robertson, C.
A similar situation is observed for the uranium system.
Organometallics 2007,
26, 692–701.
(46) Summerscales, O.; Cloke, F.; Hitchcock, P.; Green, J. C.; Hazari,
Starting from
6A, the lowest energy transition states for both
N.
Science 2006,
311, 829–831.
sp2 and sp3 C-H bond activation of 2-picoline are the five-
(47) Andrews, L.; Lyon, J. T.
Inorg. Chem. 2006,
45, 1847–1852.
member agostic structures,
TS
(48) Clark, D. L.; Grumbine, S. K.; Scott, B. L.; Watkin, J. G.
6A-3A and
TS6A-4A, respectively
Organometallics 1996,
15, 949–957.
(Figure 8). The U · · · H-Csp2 and U · · · H-Csp3 U-H distances
(49) Barnhart, D.; Clark, D. L.; Grumbine, S. K.; Watkin, J. G.
Inorg.
are 2.247 and 2.258 Å, respectively, in transition states and
Chem. 1995,
34, 1695–1699.
Bond ActiV
ation Chemistry of (C5Me5)2An(CH3)2
Organometallics, Vol. 27, No. 7, 2008 1391
Figure 11. NPA charges on the actinide metal center.
Figure 10. Reaction energy diagram for the sp2 and sp3 C-H bond
activation chemistry between (C5H5)2U(CH3)2 and 2-picoline.
transition state structures and reaction energy profile for thesespecies are given in Figure S2 in the Supporting Information.
The calculated reaction pathway for insertion of the adduct
6A of (C5H5)2U(CH3)2 into the picoline C-H bonds is illustrated
in Figure 10. In contrast to what was found in the thorium
reaction, the sp3 activation (
TS6A-4A) is associated with a higher
activation energy than sp2 activation (
TS6A-3A) by 1.24 kcal/
mol. In the case of uranium, the thermodynamically favored
product is also the kinetically favored one, leading to the sp2
product as the only observed product. We also note a larger
difference between the sp2 and sp3 activation barrier (1.24 kcal/
mol) in uranium compared with thorium (0.5 kcal/mol). Despite
these small differences, the result is nevertheless consistent with
experimental data since no kinetic sp3 product is observed in
the uranium reaction.
The overall results regarding the trends in sp2 vs sp3 activation
Figure 12. Orbital population on the actinide metal center.
pathways are encouraging in that they delineate the experimentalobservations to date regarding the difference between Th and
structures and reaction energy profile for these species are given
U complexes. With respect to the conclusions from previous
in Figure S3 in the Supporting Information.
studies12,20,21 we first note that these activation energies are
Electronic Properties and Solvent Effects. In this section
calculated for the model C5H5 systems. Larger differences might
we examine the electronic properties of the reactants, products,
be anticipated between the activation barriers for sp2 versus sp3
and transition states in order to understand the similarities and
for C5Me5 systems. Indeed we observed larger energy differ-
differences found between the Th and U complexes. Although
ences between product isomers using C5Me5 than with the model
the differences in thermochemistry and kinetic barriers are
C5H5 ligand.
consistent with experiment, the differences are subtle involving
We also investigated alternative pathways involving the
very small energy changes. We have found no single dominant
adducts
6B,
6C, and
6D. These were found to give higher
factor that explains these results.
barriers, the same as in the thorium system. The transition state
We begin by discussing the charges determined from the
NBO analysis. The NPA charges for the reactants, adducts,
(50) We have used electronic energies here to examine the reaction
transition states, and products for the sp2 and sp3 insertion
pathways. The quantitative results and the trends between Th and U would
pathways are shown in Figure 11 for both Th and U cases. For
have been equally well given by the enthalpies at 298 K (see Tables S5
Th the natural charges are found to be 2.11, 1.93, and 1.95
and S6 in the Supporting Information). The Gibbs free energies at 298 Kalso give consistent predictions as given above with the exception of the
respectively for the reactant, the sp2 product (
1A), and the sp3
relative ordering of the Th sp2 and sp3 activation barriers (-1.4 kcal/mol)
product (
2A). As is typically the case, these charges are much
compared to ZPE corrected energies (+0.7 kcal/mol) The quantities in
smaller than those for the formal +4 oxidation state because of
context use electronic energies without zero-point corrections. Because thelow rotation mode of the methyl group on the picoline ring is constrained
ligand donation of electron density into primarily metal 6d and
in the sp3 activation path, the frequencies of
TS5A-2A(sp3) are higher than
5f orbitals. The 6d and 5f populations are depicted in Figure
that of
TS5A-1A(sp2). As a result, the lower entropy contribution of
12 (actual values may be found in Table S4 in the Supporting
TS5A-2A(sp3) leads to a higher Gibbs free energy (
G )
H -
TS) compared
to
TS
Information). The thorium 6d populations are 1.29 and 1.38
5A-1A(sp2). This observation also holds for the uranium system as well.
However, the entropy contributions are calculated for gas-phase species.
electrons for the TST and product along the sp2 pathway and
For reactions in solution, as in the present calculations, the translational,
1.22 and 1.26 electrons for TST and product along the sp3
rotational, and low-frequency vibrational contributions to the entropy can
pathway. Corresponding values for 5f populations are 0.28 and
be reduced. And as a result, the gas-phase free energies may overestimatethe reaction barrier. For a recent discussion, see ref 38.
0.32 along sp2 and 0.16 and 0.15 along sp3 pathways. As seen
Organometallics, Vol. 27, No. 7, 2008
Yang et al.
in Figure 11, the 6d and 5f populations are slightly higher for
spectively, by 2-picoline are shown in Figures 9 and 10,
the Th complexes along the sp2 compared to the sp3 pathway.
respectively. In summary, the reaction begins with the formation
For U similar trends can also be seen (Figure 11) in the NPA
of a weakly bound or slightly unbound adduct in the case of
charge distributions of 1.91, 1.69, and 1.75 in reactant, sp2
the model C5H5 and the C5Me5 complexes, respectively. This
product, and sp3 product, respectively, resulting in roughly 0.2
is followed by the activation of adjacent C-H bonds by the
higher electron population on the metal center when compared
An-center leading to an agostic transition state. The origin of
to Th. The U 6d populations are comparable to Th, but with
the regioselectivity rests in the highly ordered nature of the
comparable values for both transition states and slightly higher
transition states. The calculations find the sp2-activated structure
6d population for the sp2 product. The higher 5f populations
to be the thermodynamically favored one for both actinide
for U reflect the two unpaired electrons in 5f orbitals. After
metals. Despite many common features found between thorium
subtracting the population for these two electrons, the remaining
and uranium systems, including similar geometries of products,
5f populations of approximately 0.7 are higher than the 5f
adducts, and the agostic transition states, the relative activation
populations of 0.3 in the Th analogues.
energies between sp2and sp3 activation differ slightly: Th,
As noted earlier, the sp2 product is more stable than the sp3
∆
Eq(sp2) > ∆
Eq(sp3); U, ∆
Eq(sp2) < ∆
Eq(sp3).
product for both the thorium and uranium systems. From a
These results are in agreement with the experimental observa-
simply geometric perspective (Figure 2), in the sp2 product (
1A
tions that the sp2 insertion product is the thermodynamic product
and
3A) the actinide atom is in the picoline ring plane but in
in both cases, but that the sp3 insertion product is the kinetic
the sp3 product (
2A and
4A) it does not lie in the plane. This
product in the case of Th.
planar configuration can result in stronger donor-acceptorinteractions between the CdN bond on the picolyl ring and the
The differences in the competition between sp2 and sp3
5f and 6d orbitals on the actinide center. This could account
pathways for the two An-centers are subtle. Electronic property
for the fact that the sp2 product
1A is the thermodynamically
analyses confirm that both 5f and 6d orbitals are involved in
favored pathway.
the product bonding and that oxidative addition is not associated
The possible influence of solvation effects on the reaction
with the reaction process. There does not seem to be a single
mechanisms of Th and U complexes was examined by using
electronic factor accounting for the differences in reactivity. On
the polarizable Continuum Models (PCM).27,28 One does not
the basis of the combination of labeling and structural and
anticipate large changes as the reactions were carried out
computational information, we propose an "agostic migration"
experimentally in the nonpolar solvent toluene with a dielectric
cyclomelatation mechanism for C-H activation of N-hetero-
constant of 2.38. The solvent effects on the overall reaction
cycles by actinocene complexes.
thermochemistry and on the reaction barrier were examined.
The difference with (and without) solvent effects on thermo-
Acknowledgment. We gratefully thank Jaqueline L.
chemistry for the sp2 vs sp3 pathways was 1.6 (1.7) kcal/mol
Kiplinger for her helpful discussions and assistance in
for Th and 3.5 (2.3) kcal/mol for U. The difference between
manuscript publication. This work at Los Alamos National
barriers for the sp2 and sp3 pathways at their respective transition
Laboratory was supported by the LANL Glenn T. Seaborg
states was -0.64 (-0.54) kcal/mol for Th and +0.9 (+1.23)
Institute for Transactinium Science (Postdoctoral fellowship
kcal/mol for U, and the overall barriers changed by less than 1
to P.Y. and summer research fellowship to I.W.), the LANL
kcal/mol. The solvation effects are of the same degree because
Laboratory Directed Research and Development Program,
the complexes along the reaction pathway have similar dipole
and the Division of Chemical Sciences, Office of Basic
moments. The solvent-induced dipole moments are about 15%
Energy Sciences, U.S. Department of Energy under the
uniformly larger for reactants, adducts, transition states, and
Heavy Element Chemistry Program at Los Alamos National
products for both Th and U systems. Overall the role of solvent
Laboratory. Los Alamos National Laboratory is operated by
effects does not alter any of the previous conclusions in the
Los Alamos National Security, LLC, for the National Nuclear
previous sections regarding the thermodynamic or kinetic
Security Administration of U.S. Department of Energy under
pathways for the C-H insertion reactions.
Supporting Information Available: Tables of experimental data
The current theoretical study provides some insight into the
obtained from crystal structures and calculated structural data,
aspects of C-H activation chemistry involving the actinide
charge distributions, natural electron configurations, reaction ener-gies, and HOMO-LUMO data, as well as figures showing transition
metal center. The results of density functional theoretical
states and reaction energy surfaces. This material is available free
exploration are consistent with reported experimental results.
of charge via the Internet at http://pubs.acs.org.
The plausible reaction pathways for the insertion into the sp2and sp3 bonds of (C5H5)2Th(CH3)2 and (C5H5)2U(CH3)2, re-
Source: http://ps.uci.edu/~ffgroup/lib/exe/fetch.php/pubs/publications/yang08a.pdf
Nerves and Neuropathy Janice Wiesman M.D. Adjunct Assistant Professor of Neurology Boston University School of Medicine What is a nerve? • A nerve is a cable-like bundle of axons that runs between the spinal cord and the periphery • Axons transmit information by an electrical current that runs along the axon like a wire in your home • The axons are each surrounded by a fatty
Proceeding of 6th ICGRC 2015 6-Gingerol from Zingiberaceae as a Result of Reverse Docking for Prostate's Cancer Potential Drug Candidate Haqqi Anajili Setyanto1, Arindra Trisna Widiansyah1, Zainul Mustofa1 1 Postgraduate of Educational Biology, State University of Malang, Malang, Indonesia Prostate cancer is a cancer that attacks the prostate gland causing the death rate which is high enough. One of the causes ofprostate cancer is the androgen receptor (AR) in the gland cells that initiates the formation of excess cell proliferation, thuscausing prostate cancer. AR inhibitor that is known is antiandrogen (biculatamide and enzalutamide). This study aimed to test the6-gingerol compound of ginger as an AR inhibitor drug candidate for prostate cancer using silico methode. The 3D structure ofthe 6-gingerol compound was taken from PubChem, the prediction of targeted protein used SwissTargetPrediction andPharmapper, analysis and docking 6-gingerol and antiandrogens with AR using Pyrx software, visualization compounds andprotein interactions using PyMOLsoftware. Visualization results shows that the interaction of 6-gingerol, biculatamide, andenzalutamide with AR have the same site. This proves that the 6-gingerol is potential as anAR inhibitor candidate.